soedinglab / hh-suite

Remote protein homology detection suite.
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-019-3019-7
GNU General Public License v3.0
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Bring back HMMER3 file format #326

Closed jamaliki closed 1 year ago

jamaliki commented 1 year ago

This PR allows hh-suite to still use the HMMER format. If you'd like, I can add a warning that begs the user not to use it. But, it is important for my use-case (see https://github.com/soedinglab/hh-suite/issues/325) and I'd rather not maintain a separate fork just for a few LOC.

jamaliki commented 1 year ago

This is no longer necessary.