soft-matter / trackpy

Python particle tracking toolkit
http://soft-matter.github.io/trackpy
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FYI possible paper to note: Objective comparison of particle tracking methods #583

Open apiszcz opened 4 years ago

apiszcz commented 4 years ago

Sorry if this is a repeat. Biology focused.

https://www.nature.com/articles/nmeth.2808

Objective comparison of particle tracking methods Nicolas Chenouard, Ihor Smal[…]Erik Meijering Nature Methods volume11, pages281–289 (2014) | Download Citation

Abstract Particle tracking is of key importance for quantitative analysis of intracellular dynamic processes from time-lapse microscopy image data. Because manually detecting and following large numbers of individual particles is not feasible, automated computational methods have been developed for these tasks by many groups. Aiming to perform an objective comparison of methods, we gathered the community and organized an open competition in which participating teams applied their own methods independently to a commonly defined data set including diverse scenarios. Performance was assessed using commonly defined measures. Although no single method performed best across all scenarios, the results revealed clear differences between the various