search

sokrypton / ColabFold

Making Protein folding accessible to all!
MIT License
1.96k stars 493 forks source link

list index out of range (a3m input for complex prediction related to #76 and #136) #291

Open zjq1011 opened 2 years ago

zjq1011 commented 2 years ago

Excuse, I have copied the samples from #76 and #136

12,10 1,1

101 102 MGSSHHHHHHSQMTVVPPEGAI UniRef100_XXX1 UniRef100_XXX2 MGSAHHhhHHHHSQMTAAaPPEGAI 101 MGSSHHHHHHSQ---------- UniRef100_XXX1 MGSAHHhhHHHHSQ--------- UniRef100_XXX1_2 MGAAHHhhHHHHSQ--------- 101 ------------MTVVPPEGAI UniRef100_XXX2 ------------MTAAaPPEGAI

423,68 1,1

P06747 P06025 YKYPAIKDLKKPCITLGKAPDLNKAYKSVLSCMSAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGIVIARKGDKITPGSLVEIKRTDVEGNWALTGGMELTRDPTVPEHASLVGLLLSLYRLSKISGQSTGNYKTNIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRIEHLYSAIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAVPHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSVLGGYLGEEFFGKGTFERRFFRDEKELQEYEAAELTKTDVALADDGTVNSDDEDYFSGETRSPEAVYTRIIMNGGRLKRSHIRRYVSVSSNHQARPNSFAEFLNKTYSSDSMSKIFVNPSAIRAGLADLEMAEETVDLINRNIEDNQAHLQGEPIEVDNLPEDMGRLHLDDGKSPNPGE P06747 YKYPAIKDLKKPCITLGKAPDLNKAYKSVLSCMSAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGIVIARKGDKITPGSLVEIKRTDVEGNWALTGGMELTRDPTVPEHASLVGLLLSLYRLSKISGQSTGNYKTNIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRIEHLYSAIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAVPHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSVLGGYLGEEFFGKGTFERRFFRDEKELQEYEAAELTKTDVALADDGTVNSDDEDYFSGETRSPEAVYTRIIMNGGRLKRSHIRRYVSVSSNHQARPNSFAEFLNKTYSSDS-------------------------------------------------------------------- UniRef100_A0A0 Nucleocapsid protein (Fragment) n=1 Tax=Rabies lyssavirus TaxID=11292 RepID=A0A096XWU8_9RHAB ----AIKDLKKPSITLGKAPDLNKAYKSVLSGMNAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGILIARKGDKITPDSLVEIKRTDVEGNWALTGGMELTRDPTVSEHASLVGLLLSLYRLSKISGQNTGNYKTNIADRIEQIFETAPFVKIVEHHTLMTTHKMCANWSTIPNFRFLAGTYDMFFSRIEHLYSAIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQETAVPHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQVRSLNATVIAACAPHEMSVLGGYLGEEFFGKGTFERRFFRDEKELQEYEAAELTKTDVALADDGTVHSDDEDYFSGETRSPEAVYTR-------------------------------------------------------------------------------------------------------------- P06025 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSKIFVNPSAIRAGLADLEMAEETVDLINRNIEDNQAHLQGEPIEVDNLPEDMGRLHLDDGKSPNPGE UniRef100_A0A0 Phosphoprotein n=1 Tax=Rabies lyssavirus TaxID=11292 RepID=A0A023GV82_9RHAB ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSKIFVNPSAIRAGLADLEMAEETVDLINRNIEDNQAHLQGEPIEVDNLPEDMRRLQLDDGKPSNL--

but I still got the indexerror : list range out of range.

naokob commented 2 years ago

When I got the same error message, I solved it by changing the separator in the header to "hard tabs" instead of "soft tabs".