solgenomics / sgn

The code behind the Sol Genomics Network, Cassavabase and other Breedbase websites
https://solgenomics.net
MIT License
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store standard error with phenotypic data #4189

Closed lukasmueller closed 1 year ago

lukasmueller commented 2 years ago

Expected Behavior

For Bugs:

Environment

Steps to Reproduce

lukasmueller commented 2 years ago

Naama to request change in phenotype table from Chado project

nmenda commented 2 years ago

https://github.com/GMOD/Chado/issues/135

nmenda commented 2 years ago

https://github.com/GMOD/Chado/issues/135#issuecomment-1265735759

this raises a good question - do we intend to store stderr as a single value or indicate how it was calculated too?

if the latter then phenotypeprop would be the way to go I think

nmenda commented 2 years ago

will try to use phneotypprop. Need to add new system cvterms for the Stderr methods of measurement

lukasmueller commented 1 year ago

How far has this been implemented? I think adding the cvterms for error and type should be straightforward... maybe we need to discuss in the lab meeting?

nmenda commented 1 year ago

closed with #4679