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solgenomics / sgn

The code behind the Sol Genomics Network, Cassavabase and other Breedbase websites
https://solgenomics.net
MIT License
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check in which genotypying protocols a list of clones are genotyped #4439

Open isaak opened 1 year ago

isaak commented 1 year ago

Expected Behavior

Sometimes, users have a list of clones that they don't know in which genotyping protocols there exists marker data for their clones. Knowing this helps them to filter their list and retrieve genotype data from the right protocol for the right clones. (Prasad Peteti)

For Bugs:

Environment

Steps to Reproduce

lukasmueller commented 1 year ago

Couldn't these query be done using the Wizard? Use an accession list as starting point, then use genotyping protocols as the second column, using 'any' as the join?

lukasmueller commented 1 year ago

Hi Isaak, what do you think about the wizard method? Do you think that would address this issue? If so, we could close this ticket.

isaak commented 1 year ago

That would work, I think, at least if all the clones in the list are part of the same genotyping protocol(s) or not. The challenge is what if some clones in the list have data in a protocol, others in other protocol(s). It would help if @pvnsprasad could to elaborate on the use case...