solgenomics / sgn

The code behind the Sol Genomics Network, Cassavabase and other Breedbase websites
https://solgenomics.net
MIT License
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link genotyping markers to alleles #4930

Open lukasmueller opened 4 months ago

lukasmueller commented 4 months ago

Expected Behavior

add a linking table to phenome schema with the following structure:

table name: allele_marker

columns:

allele_marker_id  bigint primary key,
nd_protocol_id bigint references public.nd_protocol,
markers jsonb

jsonb data structure:

[ 
  {
     marker_name : 'C2_393939',
     marker_state: 'T'
 },
 ..
]

For Bugs:

Environment

Steps to Reproduce

lukasmueller commented 4 months ago

refactor the allele detail page /phenome/allele.pl to a Catalyst function