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sonatype / docker-nexus

Docker image for Sonatype Nexus
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Cannot open local storage '/nexus-data/db/security' #96

Open azizkhani opened 4 years ago

azizkhani commented 4 years ago 
2020-09-02 12:35:10,604+0000 INFO  [FelixStartLevel] *SYSTEM com.orientechnologies.orient.core.storage.impl.local.paginated.OLocalPaginatedStorage - Storage 'plocal:/nexus-data/db/component' is opened under OrientDB distribution : 2.2.36 (build d3beb772c02098ceaea89779a7afd4b7305d3788, branch 2.2.x)
2020-09-02 12:35:10,693+0000 INFO  [ForkJoinPool.commonPool-worker-1] *SYSTEM com.orientechnologies.orient.core.storage.impl.local.paginated.OLocalPaginatedStorage - Storage 'plocal:/nexus-data/db/config' is opened under OrientDB distribution : 2.2.36 (build d3beb772c02098ceaea89779a7afd4b7305d3788, branch 2.2.x)
2020-09-02 12:35:11,973+0000 ERROR [ForkJoinPool.commonPool-worker-2] *SYSTEM com.orientechnologies.orient.core.storage.impl.local.paginated.OLocalPaginatedStorage - Exception `02F0E3CD` in storage `plocal:/nexus-data/db/security`: 2.2.36 (build d3beb772c02098ceaea89779a7afd4b7305d3788, branch 2.2.x)
com.orientechnologies.orient.core.exception.OStorageException: Cannot open local storage '/nexus-data/db/security' with mode=rw
    DB name="security"
    at com.orientechnologies.orient.core.storage.impl.local.OAbstractPaginatedStorage.open(OAbstractPaginatedStorage.java:323)
    at com.orientechnologies.orient.core.db.document.ODatabaseDocumentTx.open(ODatabaseDocumentTx.java:259)
    at org.sonatype.nexus.orient.DatabaseManagerSupport.connect(DatabaseManagerSupport.java:178)
    at org.sonatype.nexus.orient.DatabaseManagerSupport.createInstance(DatabaseManagerSupport.java:312)
    at java.util.concurrent.ConcurrentHashMap.computeIfAbsent(ConcurrentHashMap.java:1688)
    at org.sonatype.nexus.orient.DatabaseManagerSupport.instance(DatabaseManagerSupport.java:289)
    at java.util.stream.ForEachOps$ForEachOp$OfRef.accept(ForEachOps.java:183)
    at java.util.Spliterators$ArraySpliterator.forEachRemaining(Spliterators.java:948)
    at java.util.stream.AbstractPipeline.copyInto(AbstractPipeline.java:482)
    at java.util.stream.ForEachOps$ForEachTask.compute(ForEachOps.java:290)
    at java.util.concurrent.CountedCompleter.exec(CountedCompleter.java:731)
    at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:289)
    at java.util.concurrent.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1056)
    at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1692)
    at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:163)
Caused by: java.lang.NullPointerException: null
    at com.orientechnologies.orient.core.storage.cache.local.twoq.O2QCache.release(O2QCache.java:448)
    at com.orientechnologies.orient.core.storage.impl.local.paginated.base.ODurableComponent.releasePage(ODurableComponent.java:166)
    at com.orientechnologies.orient.core.storage.impl.local.paginated.OPaginatedCluster.open(OPaginatedCluster.java:224)
    at com.orientechnologies.orient.core.storage.impl.local.OAbstractPaginatedStorage.openClusters(OAbstractPaginatedStorage.java:387)
    at com.orientechnologies.orient.core.storage.impl.local.OAbstractPaginatedStorage.open(OAbstractPaginatedStorage.java:290)
    ... 14 common frames omitted
2020-09-02 12:35:11,975+0000 ERROR [FelixStartLevel] *SYSTEM org.sonatype.nexus.orient.restore.RestoreServiceImpl - Failed transition: NEW -> STARTED
com.orientechnologies.orient.core.exception.OStorageException: Cannot open local storage '/nexus-data/db/security' with mode=rw
    DB name="security"
    at com.orientechnologies.orient.core.storage.impl.local.OAbstractPaginatedStorage.open(OAbstractPaginatedStorage.java:323)
    at com.orientechnologies.orient.core.db.document.ODatabaseDocumentTx.open(ODatabaseDocumentTx.java:259)
    at org.sonatype.nexus.orient.DatabaseManagerSupport.connect(DatabaseManagerSupport.java:178)
    at org.sonatype.nexus.orient.DatabaseManagerSupport.createInstance(DatabaseManagerSupport.java:312)
    at java.util.concurrent.ConcurrentHashMap.computeIfAbsent(ConcurrentHashMap.java:1688)
    at org.sonatype.nexus.orient.DatabaseManagerSupport.instance(DatabaseManagerSupport.java:289)
    at java.util.stream.ForEachOps$ForEachOp$OfRef.accept(ForEachOps.java:183)
    at java.util.Spliterators$ArraySpliterator.forEachRemaining(Spliterators.java:948)
    at java.util.stream.AbstractPipeline.copyInto(AbstractPipeline.java:482)
    at java.util.stream.ForEachOps$ForEachTask.compute(ForEachOps.java:290)
    at java.util.concurrent.CountedCompleter.exec(CountedCompleter.java:731)
    at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:289)
    at java.util.concurrent.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1056)
    at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1692)
    at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:163)
Caused by: java.lang.NullPointerException: null
    at com.orientechnologies.orient.core.storage.cache.local.twoq.O2QCache.release(O2QCache.java:448)
    at com.orientechnologies.orient.core.storage.impl.local.paginated.base.ODurableComponent.releasePage(ODurableComponent.java:166)
    at com.orientechnologies.orient.core.storage.impl.local.paginated.OPaginatedCluster.open(OPaginatedCluster.java:224)
    at com.orientechnologies.orient.core.storage.impl.local.OAbstractPaginatedStorage.openClusters(OAbstractPaginatedStorage.java:387)
    at com.orientechnologies.orient.core.storage.impl.local.OAbstractPaginatedStorage.open(OAbstractPaginatedStorage.java:290)
    ... 14 common frames omitted
2020-09-02 12:35:11,979+0000 ERROR [FelixStartLevel] *SYSTEM org.sonatype.nexus.extender.NexusContextListener - Failed to start nexus
com.orientechnologies.orient.core.exception.OStorageException: Cannot open local storage '/nexus-data/db/security' with mode=rw
    DB name="security"
    at com.orientechnologies.orient.core.storage.impl.local.OAbstractPaginatedStorage.open(OAbstractPaginatedStorage.java:323)
    at com.orientechnologies.orient.core.db.document.ODatabaseDocumentTx.open(ODatabaseDocumentTx.java:259)
    at org.sonatype.nexus.orient.DatabaseManagerSupport.connect(DatabaseManagerSupport.java:178)
    at org.sonatype.nexus.orient.DatabaseManagerSupport.createInstance(DatabaseManagerSupport.java:312)
    at java.util.concurrent.ConcurrentHashMap.computeIfAbsent(ConcurrentHashMap.java:1688)
    at org.sonatype.nexus.orient.DatabaseManagerSupport.instance(DatabaseManagerSupport.java:289)
    at java.util.stream.ForEachOps$ForEachOp$OfRef.accept(ForEachOps.java:183)
    at java.util.Spliterators$ArraySpliterator.forEachRemaining(Spliterators.java:948)
    at java.util.stream.AbstractPipeline.copyInto(AbstractPipeline.java:482)
    at java.util.stream.ForEachOps$ForEachTask.compute(ForEachOps.java:290)
    at java.util.concurrent.CountedCompleter.exec(CountedCompleter.java:731)
    at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:289)
    at java.util.concurrent.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1056)
    at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1692)
    at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:163)
Caused by: java.lang.NullPointerException: null
    at com.orientechnologies.orient.core.storage.cache.local.twoq.O2QCache.release(O2QCache.java:448)
    at com.orientechnologies.orient.core.storage.impl.local.paginated.base.ODurableComponent.releasePage(ODurableComponent.java:166)
    at com.orientechnologies.orient.core.storage.impl.local.paginated.OPaginatedCluster.open(OPaginatedCluster.java:224)
    at com.orientechnologies.orient.core.storage.impl.local.OAbstractPaginatedStorage.openClusters(OAbstractPaginatedStorage.java:387)
    at com.orientechnologies.orient.core.storage.impl.local.OAbstractPaginatedStorage.open(OAbstractPaginatedStorage.java:290)
    ... 14 common frames omitted
2020-09-02 12:35:11,986+0000 ERROR [FelixStartLevel] *SYSTEM Felix - Framework listener delivery error.
com.orientechnologies.orient.core.exception.OStorageException: Cannot open local storage '/nexus-data/db/security' with mode=rw
    DB name="security"
    at com.orientechnologies.orient.core.storage.impl.local.OAbstractPaginatedStorage.open(OAbstractPaginatedStorage.java:323)
    at com.orientechnologies.orient.core.db.document.ODatabaseDocumentTx.open(ODatabaseDocumentTx.java:259)
    at org.sonatype.nexus.orient.DatabaseManagerSupport.connect(DatabaseManagerSupport.java:178)
    at org.sonatype.nexus.orient.DatabaseManagerSupport.createInstance(DatabaseManagerSupport.java:312)
    at java.util.concurrent.ConcurrentHashMap.computeIfAbsent(ConcurrentHashMap.java:1688)
    at org.sonatype.nexus.orient.DatabaseManagerSupport.instance(DatabaseManagerSupport.java:289)
    at java.util.stream.ForEachOps$ForEachOp$OfRef.accept(ForEachOps.java:183)
    at java.util.Spliterators$ArraySpliterator.forEachRemaining(Spliterators.java:948)
    at java.util.stream.AbstractPipeline.copyInto(AbstractPipeline.java:482)
    at java.util.stream.ForEachOps$ForEachTask.compute(ForEachOps.java:290)
    at java.util.concurrent.CountedCompleter.exec(CountedCompleter.java:731)
    at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:289)
    at java.util.concurrent.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1056)
    at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1692)
    at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:163)
Caused by: java.lang.NullPointerException: null
    at com.orientechnologies.orient.core.storage.cache.local.twoq.O2QCache.release(O2QCache.java:448)
    at com.orientechnologies.orient.core.storage.impl.local.paginated.base.ODurableComponent.releasePage(ODurableComponent.java:166)
    at com.orientechnologies.orient.core.storage.impl.local.paginated.OPaginatedCluster.open(OPaginatedCluster.java:224)
    at com.orientechnologies.orient.core.storage.impl.local.OAbstractPaginatedStorage.openClusters(OAbstractPaginatedStorage.java:387)
    at com.orientechnologies.orient.core.storage.impl.local.OAbstractPaginatedStorage.open(OAbstractPaginatedStorage.java:290)
    ... 14 common frames omitted
2020-09-02 12:35:12,157+0000 INFO  [FelixStartLevel] *SYSTEM org.sonatype.nexus.extender.NexusContextListener - Uptime: 52 seconds and 448 milliseconds (nexus-oss-edition/3.26.1.02)
2020-09-02 12:35:12,157+0000 INFO  [FelixStartLevel] *SYSTEM org.sonatype.nexus.extender.NexusLifecycleManager - Shutting down
2020-09-02 12:35:12,166+0000 INFO  [FelixStartLevel] *SYSTEM org.sonatype.nexus.extender.NexusLifecycleManager - Stop STORAGE
2020-09-02 12:35:12,170+0000 INFO  [FelixStartLevel] *SYSTEM org.sonatype.nexus.internal.orient.DatabaseServerImpl$1 - OrientDB Server is shutting down...
2020-09-02 12:35:12,171+0000 INFO  [FelixStartLevel] *SYSTEM org.sonatype.nexus.internal.orient.DatabaseServerImpl$1 - Shutting down protocols
2020-09-02 12:35:12,179+0000 INFO  [FelixStartLevel] *SYSTEM com.orientechnologies.orient.server.plugin.OServerPluginManager - Shutting down plugins:
2020-09-02 12:35:12,180+0000 INFO  [FelixStartLevel] *SYSTEM com.orientechnologies.orient.server.plugin.OServerPluginManager - - jmx
2020-09-02 12:35:12,181+0000 INFO  [FelixStartLevel] *SYSTEM org.sonatype.nexus.internal.orient.DatabaseServerImpl$1 - OrientDB Server shutdown complete
2020-09-02 12:35:12,181+0000 INFO  [FelixStartLevel] *SYSTEM com.orientechnologies.orient.core.Orient - Orient Engine is shutting down...
2020-09-02 12:35:12,190+0000 INFO  [FelixStartLevel] *SYSTEM com.orientechnologies.orient.core.Orient - - shutdown storage: component...
2020-09-02 12:35:12,461+0000 INFO  [FelixStartLevel] *SYSTEM com.orientechnologies.orient.core.Orient - - shutdown storage: security...
2020-09-02 12:35:12,462+0000 INFO  [FelixStartLevel] *SYSTEM com.orientechnologies.orient.core.Orient - - shutdown storage: config...
2020-09-02 12:35:12,714+0000 INFO  [FelixStartLevel] *SYSTEM com.orientechnologies.orient.core.Orient - - shutdown storage: OSystem...
2020-09-02 12:35:13,810+0000 INFO  [FelixStartLevel] *SYSTEM com.orientechnologies.orient.core.Orient - OrientDB Engine shutdown complete
2020-09-02 12:35:13,811+0000 INFO  [FelixStartLevel] *SYSTEM org.sonatype.nexus.internal.orient.DatabaseServerImpl - Shutdown
2020-09-02 12:35:13,811+0000 INFO  [FelixStartLevel] *SYSTEM org.sonatype.nexus.extender.NexusLifecycleManager - Stop KERNEL
[root@server asa]#
myco commented 1 year ago

For me fixing permissions in the security directory fixed the issue. For example: chown -R nexus:nexus /nexus-data/db/security Permissions where broken because I connected directly to OrientDB from root user.