sorgerlab / earm

Extrinsic Apoptosis Reaction Model
http://sorgerlab.github.com/earm
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Make sure that all modules are consistent with respect to Bid initial conditions #8

Open johnbachman opened 12 years ago

johnbachman commented 12 years ago

Some of the Shen models don't have Bid initial conditions because the precise initial condition varies depending on the figure/simulation in the paper. This leads to confusion when composing the model with rec_to_bid and pore_to_parp, because the Bid initial condition must then be added.

Better to have a default initial condition for Bid that is consistent across models and that can be overridden.