sorgerlab / indra

INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system interfacing with NLP systems and databases to collect knowledge, and through a process of assembly, produce causal graphs and dynamical models.
http://indra.bio
BSD 2-Clause "Simplified" License
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Add ECOTOX Knowledgebase #1362

Open cthoyt opened 2 years ago

cthoyt commented 2 years ago

I came across the ECOTOX Knowledgebase in https://arxiv.org/pdf/2112.04605.pdf. It seems to be centered around the ecological effects of chemicals (e.g., on certain organisms). This needs a bit more investigation to confirm is in scope for INDRA, and might be useful to come back to later

Homepage: https://cfpub.epa.gov/ecotox/ Direct download: https://gaftp.epa.gov/ecotox/ecotox_ascii_09_15_2021.zip Information about file format: https://cfpub.epa.gov/ecotox/help.cfm?sub=term-appendix