sorgerlab / indra

INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system interfacing with NLP systems and databases to collect knowledge, and through a process of assembly, produce causal graphs and dynamical models.
http://indra.bio
BSD 2-Clause "Simplified" License
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Improvements in source processing #1384

Closed bgyori closed 2 years ago

bgyori commented 2 years ago

This PR improves the BioPAX processor to better handle isoforms from UniProt, and adds a new API function fo processing HPRD content directly from the downloadable archive.