sorgerlab / indra

INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system interfacing with NLP systems and databases to collect knowledge, and through a process of assembly, produce causal graphs and dynamical models.
http://indra.bio
BSD 2-Clause "Simplified" License
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Update SIGNOR processor and FamPlex #1409

Closed bgyori closed 1 year ago

bgyori commented 1 year ago

This PR updates the SIGNOR processor to work with the latest SIGNOR data, and makes some improvements and extensions to processing. It also incorporates updates to FamPlex: https://github.com/sorgerlab/famplex/pull/192 that extend coverage of SIGNOR protein families.