Create meanbXXX and do Tensor fit after upsampling of DWI - Githubissues

sotnir / NENAH-BIDS

A collaborate platform for streamlining a BIDS workflow for the NENAH study, on the linux workstation based at University of Southampton.

https://www.southampton.ac.uk/cndng

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Create meanbXXX and do Tensor fit after upsampling of DWI #158

Closed finnlennartsson closed 1 week ago

finnlennartsson commented 1 month ago

We should do the generate meanbXXX and calculate Tensor after we have done the upsampling.

Today they are done as the last thing we do in the dMRI/preprocess_QC.sh https://github.com/sotnir/NENAH-BIDS/blob/d2279c4aeab4f61b4685ecc8a16c3876d3e4c867/dMRI/preprocess_QC.sh#L291-L324

Since we are going to introduce and upsampling of the DWI, we should do this after this.