Installation failed

[HDEzhsw]

Downloading GitHub repo soumelis-lab/ICELLNET@master Error in utils::download.file(url, path, method = method, quiet = quiet, : download from 'https://api.github.com/repos/soumelis-lab/ICELLNET/tarball/master' failed

[lmassenet-regad]

Hi I need some additional information to help. How did you try to install ICELLNET ?

Here is the installation instructions:

install.packages(c("devtools", "jetset", "readxl", "psych", "GGally", "gplots", "ggplot2", "RColorBrewer", "data.table", "grid", "gridExtra", "ggthemes", "scales","rlist")) ##Installs devtools and the icellnet CRAN dependancies
if (!requireNamespace("BiocManager", quietly = TRUE)) # Installs icellnet Bioconductor dependancies 
    install.packages("BiocManager")
BiocManager::install(c("BiocGenerics", "org.Hs.eg.db", "hgu133plus2.db", "annotate"))
library(devtools)
install_github("soumelis-lab/ICELLNET",ref="master", subdir="icellnet")

[HDEzhsw]

Dear Lucile, Thanks for your prompt reply. The installation codes are the same as yours.

install.packages(c("devtools", "curl", "jetset", "readxl", "psych", "GGally", "gplots", "ggplot2", "RColorBrewer", "data.table", "grid", "gridExtra", "ggthemes", "scales","rlist"))  if (!requireNamespace("BiocManager", quietly = TRUE)) # Installs Bioconductor dependancies    install.packages("BiocManager") BiocManager::install(c("BiocGenerics", "org.Hs.eg.db", "hgu133plus2.db", "annotate")) library(devtools) install_github("soumelis-lab/ICELLNET",ref="master", subdir="icellnet")

Is there something wrong with the access to "soumelis-lab/ICELLNET"? Best, Hao Zhang ------------------ Original ------------------ From: @.>; Date:  Fri, Sep 15, 2023 05:26 PM To: @.>; Cc: @.>; @.>; Subject:  Re: [soumelis-lab/ICELLNET] Installation failed (Issue #14)

 

Hi I need some additional information to help. How did you try to install ICELLNET ?

Here is the installation instructions: install.packages(c("devtools", "jetset", "readxl", "psych", "GGally", "gplots", "ggplot2", "RColorBrewer", "data.table", "grid", "gridExtra", "ggthemes", "scales","rlist")) ##Installs devtools and the icellnet CRAN dependancies if (!requireNamespace("BiocManager", quietly = TRUE)) # Installs icellnet Bioconductor dependancies install.packages("BiocManager") BiocManager::install(c("BiocGenerics", "org.Hs.eg.db", "hgu133plus2.db", "annotate")) library(devtools) install_github("soumelis-lab/ICELLNET",ref="master", subdir="icellnet")
— Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you authored the thread.Message ID: @.***>

[HDEzhsw]

Dear Lucile, This is a follow-up to my last email. I have successfully installed ICELLNET. I changed my IP address to fix the issue. Thanks for your kind help. Best, Hao Zhang ------------------ Original ------------------ From:  "Lucile @.>; Date:  Fri, Sep 15, 2023 05:26 PM To: @.>; Cc: @.>; @.>; Subject:  Re: [soumelis-lab/ICELLNET] Installation failed (Issue #14)

 

Hi I need some additional information to help. How did you try to install ICELLNET ?

Here is the installation instructions: install.packages(c("devtools", "jetset", "readxl", "psych", "GGally", "gplots", "ggplot2", "RColorBrewer", "data.table", "grid", "gridExtra", "ggthemes", "scales","rlist")) ##Installs devtools and the icellnet CRAN dependancies if (!requireNamespace("BiocManager", quietly = TRUE)) # Installs icellnet Bioconductor dependancies install.packages("BiocManager") BiocManager::install(c("BiocGenerics", "org.Hs.eg.db", "hgu133plus2.db", "annotate")) library(devtools) install_github("soumelis-lab/ICELLNET",ref="master", subdir="icellnet")
— Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you authored the thread.Message ID: @.***>