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soumelis-lab / ICELLNET

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How adapt an other ligand/receptor database to ICELLNET format #4

Closed lmassenet-regad closed 3 years ago

lmassenet-regad commented 3 years ago

Hi there, Thanks so much! Would you be able to advise me as to how I can adapt the celltalkDB to fit the ICELLNET database format? It seems I would have to adapt the R code of the db.hgu133plus2() function to have the adapted annotation conversion when using ICELLNET? But as I'm fairly new to R still i'd definitely appreciate any advice on how to go about doing this

thanks so much for your time Rachel

Originally posted by @rachel662 in https://github.com/soumelis-lab/ICELLNET/issues/2#issuecomment-786240312