sourmash-bio / sourmash

Quickly search, compare, and analyze genomic and metagenomic data sets.
http://sourmash.readthedocs.io/en/latest/
Other
467 stars 80 forks source link

make a `sourmash sketch fromfile` to support large scale sketching. #1671

Closed ctb closed 2 years ago

ctb commented 3 years ago

ref https://github.com/sourmash-bio/sourmash/issues/1652, you want to be able to sketch certain ksizes/moltypes for certain identifiers only, but on a large scale. how can we best do this?