sourmash-bio / sourmash

Quickly search, compare, and analyze genomic and metagenomic data sets.
http://sourmash.readthedocs.io/en/latest/
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Bump conda-incubator/setup-miniconda from 3.0.4 to 3.1.0 #3373

Closed dependabot[bot] closed 2 weeks ago

dependabot[bot] commented 2 weeks ago

Bumps conda-incubator/setup-miniconda from 3.0.4 to 3.1.0.

Release notes

Sourced from conda-incubator/setup-miniconda's releases.

Version 3.1.0

Features

  • #367: Add conda-remove-defaults setting to remove the defaults channel if added implicitly
  • #342: Add installation-dir to customize where the installers are installed to
  • #328: Make conda's cache configurable via pkgs-dirs

Fixes

  • #360: Start deprecation of miniforge-variant: Mambaforge
  • #362: Ignore conda cygpath warning
  • #368: Address mamba v2 incompatibilities
  • #350: set CONDA environment variable regardless of useBundled option

Tasks and Maintenance

  • #353: Bump semver and @​types/semver
  • #356: Bump braces from 3.0.2 to 3.0.3
  • #359: Bump semver from 7.6.2 to 7.6.3
  • #370: Bump @​actions/core from 1.10.1 to 1.11.1

#360: conda-incubator/setup-miniconda#360 #362: conda-incubator/setup-miniconda#362 #368: conda-incubator/setup-miniconda#368 #367: conda-incubator/setup-miniconda#367 #342: conda-incubator/setup-miniconda#342 #328: conda-incubator/setup-miniconda#328 #350: conda-incubator/setup-miniconda#350 #348: conda-incubator/setup-miniconda#348 #353: conda-incubator/setup-miniconda#353 #356: conda-incubator/setup-miniconda#356 #359: conda-incubator/setup-miniconda#359 #370: conda-incubator/setup-miniconda#370

Changelog

Sourced from conda-incubator/setup-miniconda's changelog.

CHANGELOG

v3.1.0 (2024-10-31)

Features

  • #367: Add conda-remove-defaults setting to remove the defaults channel if added implicitly
  • #342: Add installation-dir to customize where the installers are installed to
  • #328: Make conda's cache configurable via pkgs-dirs

Fixes

  • #360: Start deprecation of miniforge-variant: Mambaforge
  • #362: Ignore conda cygpath warning
  • #368: Address mamba v2 incompatibilities
  • #350: set CONDA environment variable regardless of useBundled option

Tasks and Maintenance

  • #348: Bump conda-incubator/setup-miniconda from 3.0.3 to 3.0.4
  • #353: Bump semver and @​types/semver
  • #356: Bump braces from 3.0.2 to 3.0.3
  • #359: Bump semver from 7.6.2 to 7.6.3
  • #370: Bump @​actions/core from 1.10.1 to 1.11.1

#360: conda-incubator/setup-miniconda#360 #362: conda-incubator/setup-miniconda#362 #368: conda-incubator/setup-miniconda#368 #367: conda-incubator/setup-miniconda#367 #342: conda-incubator/setup-miniconda#342 #328: conda-incubator/setup-miniconda#328 #350: conda-incubator/setup-miniconda#350 #348: conda-incubator/setup-miniconda#348 #353: conda-incubator/setup-miniconda#353 #356: conda-incubator/setup-miniconda#356 #359: conda-incubator/setup-miniconda#359 #370: conda-incubator/setup-miniconda#370

[v3.0.4] (2024-04-25)

Fixes

  • #345 Fix running on macOS 13 on Intel since the runners no longer provide miniconda by default.

Tasks and Maintenance

... (truncated)

Commits
  • d2e6a04 Update changelog for 3.1.0 (#373)
  • 0e14962 Bump @​actions/core from 1.10.1 to 1.11.1 (#370)
  • 4a3d80f Bump semver from 7.6.2 to 7.6.3 (#359)
  • 27f1202 set CONDA environment variable regardless of useBundled option (#350)
  • 1a6b55c Make conda’s package directories configurable (#328)
  • 6225267 Add installation-dir to customize where the installers are installed to (#342)
  • 65da104 Add 'conda-remove-defaults' setting and support 'nodefaults' as a keyword cha...
  • 899c78d Address mamba v2 incompatibilities (#368)
  • 8f65dda Ignore conda cygpath warning (#362)
  • e5293c8 Start deprecation of miniforge-variant: Mambaforge (#360)
  • Additional commits viewable in compare view


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codecov[bot] commented 2 weeks ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 86.46%. Comparing base (fdfd372) to head (fa3a387). Report is 1 commits behind head on latest.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## latest #3373 +/- ## ========================================== - Coverage 86.46% 86.46% -0.01% ========================================== Files 137 137 Lines 16090 16090 Branches 2219 2219 ========================================== - Hits 13913 13912 -1 - Misses 1870 1871 +1 Partials 307 307 ``` | [Flag](https://app.codecov.io/gh/sourmash-bio/sourmash/pull/3373/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sourmash-bio) | Coverage Δ | | |---|---|---| | [hypothesis-py](https://app.codecov.io/gh/sourmash-bio/sourmash/pull/3373/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sourmash-bio) | `25.43% <ø> (ø)` | | | [python](https://app.codecov.io/gh/sourmash-bio/sourmash/pull/3373/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sourmash-bio) | `92.40% <ø> (ø)` | | | [rust](https://app.codecov.io/gh/sourmash-bio/sourmash/pull/3373/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sourmash-bio) | `62.21% <ø> (-0.04%)` | :arrow_down: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=sourmash-bio#carryforward-flags-in-the-pull-request-comment) to find out more.

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ctb commented 2 weeks ago

@dependabot rebase