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soybase / jekyll-soybase

SoyBase site, forked from jekyll-legumeinfo mid-2022; built with Jekyll and served on GitHub Pages
Apache License 2.0
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Enable JBrowse tracklist by default #118

Closed nathanweeks closed 5 months ago

nathanweeks commented 5 months ago

Fixes #117

Requires JBrowse version bump to fix https://github.com/GMOD/jbrowse-components/pull/4250

nathanweeks commented 5 months ago

Was make jbrowse executed before make?

maxglycine commented 5 months ago

@nathan @jd-campbell I did make jbrowse and then make and it does appear to work. I picked the Wm82.a2 Gm01 jbrowse link. But there is a thing. In the browser that is integrated, the link to jbrowse did not work for me. If I copied the URL and then went to FF and pasted the URL in it, Jbrowse came up and the track picker box was open and had a bunch of tracks to choose from.

nathanweeks commented 5 months ago

@nathan @jd-campbell I did make jbrowse and then make and it does appear to work. I picked the Wm82.a2 Gm01 jbrowse link. But there is a thing. In the browser that is integrated, the link to jbrowse did not work for me. If I copied the URL and then went to FF and pasted the URL in it, Jbrowse came up and the track picker box was open and had a bunch of tracks to choose from.

It is definitely more reliable to use a real browser tab if rendering any javascript-heavy content. For convenience, one can click the box with the arrow in the top-right corner of the simple browser view to open the page in a new tab.