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spacetx / starfish

starfish: unified pipelines for image-based transcriptomics
https://spacetx-starfish.readthedocs.io/en/latest/
MIT License
225 stars 67 forks source link

Use python requests to bypass certificate errors #1919

Closed ttung closed 3 years ago

ttung commented 3 years ago

On travis's windows machines, the certs are not set up correctly. pandas uses python's default url library, which uses the system setup. python requests, however, uses the mozilla root cert store, which is independent of the system config.

codecov-io commented 3 years ago

Codecov Report

Merging #1919 (89c3817) into master (1b29c4b) will increase coverage by 0.00%. The diff coverage is 100.00%.

Impacted file tree graph

@@           Coverage Diff           @@
##           master    #1919   +/-   ##
=======================================
  Coverage   87.73%   87.74%           
=======================================
  Files         168      168           
  Lines        5791     5793    +2     
=======================================
+ Hits         5081     5083    +2     
  Misses        710      710
Impacted Files Coverage Δ
starfish/test/full_pipelines/api/test_dartfish.py 100.00% <100.00%> (ø)
starfish/test/full_pipelines/api/test_merfish.py 100.00% <100.00%> (ø)

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