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spacetx / starfish

starfish: unified pipelines for image-based transcriptomics
https://spacetx-starfish.readthedocs.io/en/latest/
MIT License
223 stars 67 forks source link

Upgrade to a consistent version of pip in all workflows #1935

Closed ttung closed 3 years ago

ttung commented 3 years ago

Always upgrade to $PIP_VERSION.

A couple minor changes:

  1. Add a pip freeze to the test workflows to ensure we know what's being installed.
  2. Do not include pip in requirements.txt because windows freaks out if it's asked to install pip in a requirements.txt file.
codecov-io commented 3 years ago

Codecov Report

Merging #1935 (e65fe11) into master (4aa5e22) will not change coverage. The diff coverage is n/a.

Impacted file tree graph

@@           Coverage Diff           @@
##           master    #1935   +/-   ##
=======================================
  Coverage   87.71%   87.71%           
=======================================
  Files         168      168           
  Lines        5796     5796           
=======================================
  Hits         5084     5084           
  Misses        712      712

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