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spacetx / starfish

starfish: unified pipelines for image-based transcriptomics
https://spacetx-starfish.readthedocs.io/en/latest/
MIT License
228 stars 68 forks source link

Release 0.3.0 #2021

Closed shachafl closed 1 month ago

shachafl commented 1 month ago

Following the "Deployment" steps in the Makefile, I have done the following: 1) Updated the CHANGELOG.md file 2) Made some minor corrections to resolve errors when running example pipelines 3) Corrected the "Windows" Operating System classifier in setup.cfg

I have also uploaded the package to TestPyPI, but couldn't pip install ... as some dependencies don't work via testpypi.

shachafl commented 1 month ago

@berl, @njmei, can one of you please review this PR?

njmei commented 1 month ago

@shachafl I see a lot of fix entries in the "changelog" file but I don't see the corresponding commits in this PR? Were they already merged into the master branch?

shachafl commented 1 month ago

@shachafl I see a lot of fix entries in the "changelog" file but I don't see the corresponding commits in this PR? Were they already merged into the master branch?

@njmei, you are right, most commits up to this PR were already merged to master. Also, last release (and tag) was about 3 years ago and so, when generating the CHANGLOG.md via make release-changelog it added all PRs since the last tag. I ended up removing some redundancy, but kept most of it for historical reference. Let me know if you think some entries should be removed.