spatialtopology / spacetop-prep

code for transferring data and preprocessing
MIT License
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[BUG] sub-0001_ses-01_task-alignvideos_run-01 to run-04 #101

Closed jungheejung closed 3 months ago

jungheejung commented 3 months ago

Which module is this from?

beh

What is the issue?

Data partially exists in .mat file, not .csv file

What was your expected behavior?

The alignvideo python script was supposed to convert .csv to BIDS-valid _events.tsv. It failed

How can we reproduce this?

(Write your answer here.)

Any additional context?

(Write your answer here.)

jungheejung commented 3 months ago

Resolved via datalad commits

b191d62db1abca5a4a46e69a33eea9e2cabcf429

13d1d6db4c235c9db2525f3f4b32596e6edd91cf

4d6adc447a944e1c406ad4566322a748f34e47a7

72e1d7e4f803578099bd9875b0734e640571ce84

Author: jungheejung <heejung.jung@colorado.edu>
Date:   Tue Jun 25 02:51:05 2024 +0000

    [DATALAD RUNCMD] DEV: recover behavioral data from sub-0001 mat files and convert to BIDS events data

    === Do not change lines below ===
    {
     "chain": [],
     "cmd": "python ./code/spacetop-prep/spacetop_prep/events/bidsify_alignvideos_ENH.py --bids_string sub-0001/ses-01/func/sub-0001_ses-01_task-alignvideo_acq-mb8_run-01_events.tsv",
     "dsid": "2ee2bfa7-6c1b-4cf6-87e9-297e30f42517",
     "exit": 0,
     "extra_inputs": [],
     "inputs": [],
     "outputs": [],
     "pwd": "."
    }
    ^^^ Do not change lines above ^^^