spatialtopology / spacetop-prep

code for transferring data and preprocessing
MIT License
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[DUP] sub-0039_ses-01_acq-mb8_dir-ap_run-01 fmap #13

Closed jungheejung closed 4 months ago

jungheejung commented 2 years ago

TODO:

fmriprep output

                ./sub-0039/ses-01/fmap/sub-0039_ses-01_acq-mb8_dir-ap_run-01_epi__dup-01.json
                        Evidence: sub-0039_ses-01_acq-mb8_dir-ap_run-01_epi__dup-01.json
                ./sub-0039/ses-01/fmap/sub-0039_ses-01_acq-mb8_dir-ap_run-01_epi__dup-01.nii.gz
                        Evidence: sub-0039_ses-01_acq-mb8_dir-ap_run-01_epi__dup-01.nii.gz
                ./sub-0039/ses-01/fmap/sub-0039_ses-01_acq-mb8_dir-pa_run-01_epi__dup-01.json
                        Evidence: sub-0039_ses-01_acq-mb8_dir-pa_run-01_epi__dup-01.json
                ./sub-0039/ses-01/fmap/sub-0039_ses-01_acq-mb8_dir-pa_run-01_epi__dup-01.nii.gz
                        Evidence: sub-0039_ses-01_acq-mb8_dir-pa_run-01_epi__dup-01.nii.gz

scannotes

- PVC 01: participant is not responding in the expect phase. 
- PVC 02: participant did not respond to the same/diff mental rotation task, we checked after the run, and participant confirmed that her response was not fast enough. 
- PVC 03: participant ran under John Smith instead of sub-0039
- no data collected for align videos 03 04 due to timing
jungheejung commented 4 months ago

Deleted dups

commit c0940dc881edf6c564dc40d0bbd0238a87aaa188
Author: jungheejung <heejung.jung@colorado.edu>
Date:   Sat Mar 9 19:41:15 2024 +0000

    [DATALAD RUNCMD] DEV: remove dups

    === Do not change lines below ===
    {
     "chain": [],
     "cmd": "./code/spacetop-prep/spacetop_prep/datalad/remove_dups_anatfmap.sh",
     "dsid": "2ee2bfa7-6c1b-4cf6-87e9-297e30f42517",
     "exit": 0,
     "extra_inputs": [],
     "inputs": [],
     "outputs": [],
     "pwd": "."
    }
    ^^^ Do not change lines above ^^^

 sub-0039/ses-01/fmap/sub-0039_ses-01_acq-mb8_dir-ap_run-01_epi__dup-01.json   | 168 ----------------------------------------------------------------------------------------------------------------------
 sub-0039/ses-01/fmap/sub-0039_ses-01_acq-mb8_dir-ap_run-01_epi__dup-01.nii.gz |   1 -
 sub-0039/ses-01/fmap/sub-0039_ses-01_acq-mb8_dir-pa_run-01_epi__dup-01.json   | 168 ----------------------------------------------------------------------------------------------------------------------
 sub-0039/ses-01/fmap/sub-0039_ses-01_acq-mb8_dir-pa_run-01_epi__dup-01.nii.gz |   1 -
 4 files changed, 338 deletions(-)