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spatialtopology / spacetop-prep

code for transferring data and preprocessing
MIT License
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[DUP] sub-0057_ses-01_acq-mb8_dir-ap_run-02 fmap #24

Closed jungheejung closed 4 months ago

jungheejung commented 2 years ago

TODO:

fmriprep output

                ./sub-0057/ses-01/fmap/sub-0057_ses-01_acq-mb8_dir-ap_run-02_epi__dup-01.json
                        Evidence: sub-0057_ses-01_acq-mb8_dir-ap_run-02_epi__dup-01.json
                ./sub-0057/ses-01/fmap/sub-0057_ses-01_acq-mb8_dir-ap_run-02_epi__dup-01.nii.gz
                        Evidence: sub-0057_ses-01_acq-mb8_dir-ap_run-02_epi__dup-01.nii.gz
                ./sub-0057/ses-01/fmap/sub-0057_ses-01_acq-mb8_dir-pa_run-02_epi__dup-01.json
                        Evidence: sub-0057_ses-01_acq-mb8_dir-pa_run-02_epi__dup-01.json
                ./sub-0057/ses-01/fmap/sub-0057_ses-01_acq-mb8_dir-pa_run-02_epi__dup-01.nii.gz
                        Evidence: sub-0057_ses-01_acq-mb8_dir-pa_run-02_epi__dup-01.nii.gz

scannotes

- insufficient time to complete align video run 4; WILL ADD TO SES-02
- Pain runs INCOMPLETE because biopac wasn't working (thermode onset cant be determined)

Check scannotes. ses-01 align video run-04 was scanned during ses-02 with a separate accession number

jungheejung commented 4 months ago

./sub-0057/ses-01/fmap/sub-0057_ses-01_acq-mb8_dir-ap_run-02_epi__dup-01.json PRIMARYJSON acquisition time is earlier. Error: PRIMARYJSON "10:21:25 37285 has an earlier time than DUPJSON "19:37:51 70671

jungheejung commented 4 months ago

Deleted json. Check datalad code/remove_dups_fmap_sub-0057.sh