speciationgenomics / scripts

Scripts for analysis used during the course
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Error: Polyploidy found, and not supported by vcftools #14

Open Razi1026 opened 2 years ago

Razi1026 commented 2 years ago

Hi Mark,

I ran Treemix and I got this error:

Error: Polyploidy found, and not supported by vcftools: 33:48

So it seems I can't use this tool for my polyploidy samples. Maybe if we replace bcftools with vcftools, it is a good idea?

Thank you!

Best,