Implement and test incremental clustering - Githubissues

spectra-cluster / spectra-cluster-2

A complete re-write of the spectra-cluster codebase

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Implement and test incremental clustering #87

Closed jgriss closed 4 years ago

jgriss commented 5 years ago

Features

Input support for .clustering files
Adapt ClusteringEngine for incremental clustering
- Add function addSpectra(IBinarySpectrum...)
- Add function addCluster(ICluster...)
Adapt cli (Tool class)

Tasks

[x] Change complete I/O to always return ICluster
[x] Add input support for .clustering
[x] Adapt GreedyClusteringEngine

Benchmark

Test how incremental clustering affects accuracy

jgriss commented 4 years ago

This was addressed in #93