posts/ai_scientist/

[utterances-bot]

Let’s Apply The AI Scientist to the SEIR Model | speed blog

https://speed1313.github.io/posts/ai_scientist/

[NAMEKDSUN]

Why do I feel like the program is stuck in an endless loop here?

Tokens: 9.8k sent, 208 received. Cost: $0.0016 message, $0.07 session. The LLM did not conform to the edit format. https://aider.chat/docs/troubleshooting/edit-errors.html

1 SEARCH/REPLACE block failed to match!

SearchReplaceNoExactMatch: This SEARCH block failed to exactly match lines in latex/template.tex

<<<<<<< SEARCH This has been explored in various studies, such as those by Funk et al. \cite{funk2009modeling}, which emphasize the importance of incorporating behavioral aspects into disease models.

This has been explored in various studies, such as those by Funk et al. \cite{funk2009modeling}, which emphasize the importance of incorporating behavioral aspects into disease models. To comprehend the dynamics of infectious disease transmission, it is imperative to incorporate human protective behavior into models of disease spreading \cite{Reitenbach2024CoupledID}.

REPLACE

The SEARCH section must exactly match an existing block of lines including all white space, comments, indentation, docstrings, etc

It seems that the previous SEARCH/REPLACE block did not match the content in latex/template.tex exactly. I will inspect the file again and provide a new
SEARCH/REPLACE block that accurately reflects the existing content.

Here’s the updated SEARCH/REPLACE block for the change you requested:

latex/template.tex

<<<<<<< SEARCH
This has been explored in various studies, such as those by Funk et al. \cite{funk2009modeling}, which emphasize the importance of incorporating behavioral aspects
into disease models.
=======
This has been explored in various studies, such as those by Funk et al. \cite{funk2009modeling}, which emphasize the importance of incorporating behavioral aspects
into disease models. To comprehend the dynamics of infectious disease transmission, it is imperative to incorporate human protective behavior into models of disease spreading \cite{Reitenbach2024CoupledID}.

REPLACE

Please confirm if this change is acceptable, and I will proceed with the update.

Tokens: 10k sent, 207 received. Cost: $0.0017 message, $0.07 session. The LLM did not conform to the edit format. https://aider.chat/docs/troubleshooting/edit-errors.html

1 SEARCH/REPLACE block failed to match!

SearchReplaceNoExactMatch: This SEARCH block failed to exactly match lines in latex/template.tex

<<<<<<< SEARCH This has been explored in various studies, such as those by Funk et al. \cite{funk2009modeling}, which emphasize the importance of incorporating behavioral aspects into disease models.

This has been explored in various studies, such as those by Funk et al. \cite{funk2009modeling}, which emphasize the importance of incorporating behavioral aspects into disease models. To comprehend the dynamics of infectious disease transmission, it is imperative to incorporate human protective behavior into models of disease spreading \cite{Reitenbach2024CoupledID}.

REPLACE

The SEARCH section must exactly match an existing block of lines including all white space, comments, indentation, docstrings, etc

Only 3 reflections allowed, stopping.

[speed1313]

Thank you for your question! As the error message states,

"The SEARCH section must exactly match an existing block of lines, including all whitespace, comments, indentation, docstrings, etc."

This error often occurs when using less sophisticated LLMs. They fail to produce the exact string that needs to be replaced. It's similar to using sed with an invalid target sentence — for example, attempting sed 's/target/replacement/' when the "target" string does not exist in the input text. Using a more advanced model like GPT-4 can sometimes help avoid this error.

[NAMEKDSUN]

Thank you for your response. I've also noticed that the capabilities of gpt-4o-mini-2024-07-18 are not sufficient to fulfill the tasks in your project. I suggest you update your blog to prevent more people from wasting unnecessary tokens.

[speed1313]

That's exactly right. I've added the warning comment to my blog post. Thank you for the advice!