integration with jamovi

[sbalci]

I think it would be very useful if there is a tangram extension for Jamovi. I thought this when reading this discussion: https://twitter.com/thosjleeper/status/1003227915981553664 https://twitter.com/serdarbalci/status/1008364257505923073

[spgarbet]

I've created an account with Jamovi and will check it out. Shouldn't be too hard.

FYI, I'm refactoring heavily which will make requests like yours easier to do. The first step was removing the need for two calls. It's now context aware with Rmarkdown. Jamovi aware can be done just as easily. Here's the example in the branch: http://htmlpreview.github.io/?https://github.com/spgarbet/tg/blob/knitr/vignettes/example.html

[sbalci]

Thank you very much for your generosity and your contributions. Best wishes.

[sbalci]

Jamovi has an integrated R code editor now: https://blog.jamovi.org/2018/07/30/rj.html I am now using Rj editor and tangram together.

Best wishes

[sbalci]

Dear @spgarbet I have implanted tangram package into a jamovi module.

With your permission I would like to submit it to be included in the jamovi when I make final adjustments.

Example screenshot:

Referenced as:

Code: https://github.com/sbalci/ClinicoPathJamoviModule https://github.com/sbalci/ClinicoPathJamoviModule/blob/master/R/crosstable.b.R

[spgarbet]

Sedar,

I welcome it's inclusion! This looks like good work. What can I do to help?

On Wed, Jan 29, 2020 at 4:54 AM Serdar Balcı notifications@github.com wrote:

Dear @spgarbet https://github.com/spgarbet I have implanted tangram package into a jamovi module.

With your permission I would like to submit it to be included in the jamovi when I make final adjustments.

Example screenshot: [image: Ekran Resmi 2020-01-29 13 42 40] https://user-images.githubusercontent.com/7208830/73350108-7cd73a00-429d-11ea-8060-c388c47ab5c0.png

Referenced as: [image: Ekran Resmi 2020-01-29 13 50 18] https://user-images.githubusercontent.com/7208830/73350799-c3796400-429e-11ea-9fbd-000c706d8df9.png

Code: https://github.com/sbalci/ClinicoPathJamoviModule

https://github.com/sbalci/ClinicoPathJamoviModule/blob/master/R/crosstable.b.R

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-- Shawn Garbett 615.397.8737

[sbalci]

Thank you very much. I have also contacted jamovi developers @jonathon-love https://github.com/jonathon-love I will update you with progress.

[sbalci]

I have built the module and submitted to jamovi. But since it has many dependencies the module size is big that is why it is not currently included in the jamovi library. It can be installed install using side-load. Thank you very much for your support.

windows: https://library.jamovi.org/win64/R3.6.1/ClinicoPath-0.0.1.jmo macOS: https://library.jamovi.org/macos/R3.6.1/ClinicoPath-0.0.1.jmo https://sbalci.github.io/ClinicoPathJamoviModule/reference/figures/jamovi-sideload.gif Details: https://sbalci.github.io/ClinicoPathJamoviModule/

[sbalci]

Dear @spgarbet , I am updating jamovi module. The recent release gives error that there is no hmisc in the scope. No error when I use 0.3.2

Debug

Error in get(style, envir = globalenv()): 'hmisc' nesnesi bulunamadı

private$.run()
tangram::html5(tangram::tangram(formula, self$data), fragment = TRUE, inline = "nejm.css", caption = paste0("Cross Table NEJM Style for Dependent ", self$options$group), id = "tbl3")
tangram::tangram(formula, self$data)
tangram.formula(formula, self$data)
get(style, envir = globalenv())

[spgarbet]

I know the cause of this and have a sketch of a solution, but our power is out here due to severe storms. Will be a few days.

[sbalci]

Dear @spgarbet thank you for your response. Please take care.

[spgarbet]

Turned into a bug ticket Issue #64