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Are the mock files necessary? #13

Open Ninahuadiy opened 7 years ago

Ninahuadiy commented 7 years ago

Hello,

Going through the latest version of the paper and file, what are the mock samples used for? I'm referring to the Mock_S280 and Mock2_S366.

Thanks! -Nina

spholmes commented 7 years ago

There were part of the overall data set and can be used for quanitfying error rates, in fact with the line:

seqtab.all <- makeSequenceTable(mergers[!grepl("Mock", names(mergers))])

we take them out and don't use them any more.

Good luck,

On Sun, Jan 1, 2017 at 1:01 PM, Ninahuadiy notifications@github.com wrote:

Hello,

Going through the latest version of the paper and file, what are the mock samples used for? I'm referring to the Mock_S280 and Mock2_S366.

Thanks!

  • Nina

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