`src/utils/gather_data.py` does not deal with session folders in BIDS

spinalcordtoolbox / disc-labeling-benchmark

Development of a disc labeling benchmark on MRI images

GNU Lesser General Public License v2.1

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`src/utils/gather_data.py` does not deal with session folders in BIDS #5

Closed NathanMolinier closed 1 year ago

NathanMolinier commented 1 year ago

Description

Some improvements need to be added to src/utils/gather_data.py to handle all possible BIDS compliant datasets. The canproco dataset cannot be treated currently due to the presence of session folders.

NathanMolinier commented 1 year ago

Solved in https://github.com/spinalcordtoolbox/disc-labeling-benchmark/pull/6