sct_get_centerline -i dwi_moco_mean.nii.gz -method auto -t t1 -o test.nii.gz
error:
WARNING : Option string does not exist and will have no effect on the execution of the script
Type -h to see supported options
Execution of the SCAD algorithm in /Users/julien/data/temp/sct_example_data/dmri
mkdir scad_output_151002121948/
sct_convert -i dwi_moco_mean.nii.gz -o /Users/julien/data/temp/sct_example_data/dmri/scad_output_151002121948/raw.nii.gz
mkdir tmp.151002121948/
sct_convert -i dwi_moco_mean.nii.gz -o tmp.151002121948/raw.nii
isct_vesselness -i raw.nii -t t1 -radius 4
Traceback (most recent call last):
File "/Users/julien/code/spinalcordtoolbox/bin/sct_get_centerline", line 1098, in <module>
scad.execute()
File "/Users/julien/code/spinalcordtoolbox/bin/sct_get_centerline", line 951, in execute
conv.convert(path_tmp+img.file_name+img.ext, self.output_filename)
File "/Users/julien/code/spinalcordtoolbox/scripts/sct_convert.py", line 61, in convert
printv('sct_convert -i '+fname_in+' -o '+fname_out, verbose, 'code')
TypeError: cannot concatenate 'str' and 'NoneType' objects
data:
syntax:
error: