Labels with missing suffixes

spine-generic / data-multi-subject

Multi-subject data for the Spine Generic project

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Labels with missing suffixes #151

Closed NathanMolinier closed 3 months ago

NathanMolinier commented 11 months ago

Description

I noticed that for some subjects masks, suffixes are missing:

derivatives/labels_softseg/sub-brnoCeitec01/anat/sub-brnoCeitec01_T1w.nii.gz
derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_flip-1_mt-on_MTS.nii.gz
derivatives/labels_softseg/sub-barcelona02/anat/sub-barcelona02_T2w.nii.gz
derivatives/labels_softseg/sub-balgrist02/anat/sub-balgrist02_flip-1_mt-on_MTS.nii.gz

@sandrinebedard should we just add _softseg ?

sandrinebedard commented 11 months ago

yes!

NathanMolinier commented 11 months ago

@sandrinebedard it seems that the problem is different actually. The two files with and without the suffix _softseg are present in the derivatives folders and they both represent soft segmentations of the spinal cord with different soft values. What should I do with these files ?

tagging @valosekj if you have any suggestions

sandrinebedard commented 10 months ago

I would keep the softseg one!