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spine-generic
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spine-generic
Acquisition and Analysis Protocol for Quantitative MRI of the Spinal Cord
https://spine-generic.rtfd.io
MIT License
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Update naming convention in `process_data.sh`
#276
sandrinebedard
closed
5 months ago
1
rl/revise1 height weight analysis
#275
renelabounek
closed
2 months ago
16
Update `process_data.sh` to be compatible with the latest datasets releases
#274
valosekj
closed
5 months ago
3
GM under-segmented on Phillips data in data-multi-subject
#273
renelabounek
opened
8 months ago
7
proces_data.sh - MTS analysis
#272
renelabounek
opened
9 months ago
1
`process_data.sh` - dorsal columns labels
#271
valosekj
closed
5 months ago
7
Migrate ReadTheDocs configuration to `.readthedocs.yaml`
#270
mguaypaq
closed
11 months ago
1
Fetch `results.zip` from r20201130 instead of the latest release
#269
mguaypaq
closed
12 months ago
2
ReadTheDocs builds failing due to missing `results.zip` asset on recent `data-multi-subject` releases
#268
mguaypaq
closed
11 months ago
5
Documentation - Rename MTS suffix
#267
valosekj
closed
1 year ago
1
Add link to interactive book of spinal cord morphometry in PAM50 space
#266
jcohenadad
opened
1 year ago
2
Clean up `sg_params_checker` so it can be run on `data-multi-subject` without crashing
#265
joshuacwnewton
closed
1 year ago
3
`sg_params_checker` crashes on data-multi-subject
#264
mguaypaq
closed
1 year ago
3
Fix most flake8 errors.
#263
kousu
closed
1 year ago
0
Move flake8 configuration into .flake8
#262
kousu
closed
1 year ago
0
Reformat code via `black`.
#261
kousu
closed
1 year ago
2
Python 3.9/3.10 maintenance
#260
kousu
closed
1 year ago
2
docs/body-size-pipeline.rst is not shown on the documentation website
#259
renelabounek
closed
9 months ago
1
Add rl/height-weight-analysis into spine-generic:master
#258
renelabounek
closed
2 years ago
9
Wrong T1 value (or legend)
#257
jcohenadad
opened
2 years ago
0
Use dwi run-01 if multiple dwi runs exist
#256
renelabounek
closed
2 years ago
0
add ucdavis flag into spinegeneric/cli/generate_figure.py
#255
renelabounek
closed
2 years ago
3
failed process_data.sh on data-multi-subject
#254
renelabounek
opened
2 years ago
5
edit tweak in docs/analysis-pipeline.rst file
#253
renelabounek
closed
2 years ago
2
`sg_params_checker`: incompatibility with new pybids?
#252
kousu
opened
2 years ago
3
MT file renaming - MTon an MToff not Identified
#251
Ctucket
closed
2 years ago
5
Cannot build the doc: issue with yaml library
#250
jcohenadad
opened
2 years ago
2
Add preprocessing and keep segmentation only
#249
sandrinebedard
closed
2 years ago
8
Consider an alternative YAML scheme for `sg_manual_correction`
#248
joshuacwnewton
opened
3 years ago
3
Fix sg_qc_bids_deface
#247
alexfoias
closed
3 years ago
1
Error `sg_qc_bids_deface`
#246
alexfoias
closed
3 years ago
0
Update requirements.txt
#245
alexfoias
closed
3 years ago
0
Missing dependency in requirements
#244
alexfoias
closed
3 years ago
0
Rename MT files according to the new BIDS convention
#243
jcohenadad
opened
3 years ago
0
Support other python versions
#242
alexfoias
opened
3 years ago
0
Update SCT version on RTD
#241
alexfoias
closed
3 years ago
0
Generate the interactive Plotly figures dynamically during documentation build
#240
alexfoias
closed
3 years ago
0
Generate the figures dynamically from dashboard
#239
alexfoias
closed
3 years ago
1
Create section "Imaging Protocol"
#238
alexfoias
closed
3 years ago
3
Add interactive graphs in RTD (currently not working-- dependent on #240)
#237
noemieroberge
closed
3 years ago
6
Origin/nr/dashboard
#236
jcohenadad
closed
3 years ago
1
DOC: Remove duplicate Multi-center data entry
#235
alexfoias
closed
3 years ago
1
Remove duplicate Multi-center data entry
#234
jcohenadad
closed
3 years ago
0
Create a section "Imaging Protocol"
#233
jcohenadad
closed
3 years ago
1
Implemented test for participants.tsv in CI
#232
alexfoias
closed
3 years ago
5
Implement test in our CI to make sure there is no error introduced in participants.tsv
#231
jcohenadad
closed
3 years ago
1
Compute GM/WM contrast on the T2* data to interpret GM CSA values
#230
jcohenadad
opened
3 years ago
0
sg_create_mosaic: Fix issues with modules compatibility; various improvements
#229
alexfoias
closed
3 years ago
1
Force two decimal digits in regression box in t1-t2 agreement figure
#228
valosekj
closed
3 years ago
1
Add rounding to T1w-T2w agreement figure
#227
valosekj
closed
3 years ago
0
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