segfault when run on a FASTA file

splatlab / squeakr

Squeakr: An Exact and Approximate k -mer Counting System

BSD 3-Clause "New" or "Revised" License

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Closed sjackman closed 7 years ago

sjackman commented 7 years ago

❯❯❯ ./main 0 20 1 test.fa
Reading from the fastq file and inserting in the QF
[1]    62215 segmentation fault  ./main 0 20 1 test.fa

prashantpandey commented 7 years ago

Squeakr currently only supports fastq file formats. Added a note in the README.

sjackman commented 7 years ago

Can you prevent it from segfaulting when reading a FASTA file, and instead produce an error message?