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splicebox / PsiCLASS

Simultaneous multi-sample transcript assembler for RNA-seq data
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Maximum number of samples #2

Closed sagnikbanerjee15 closed 4 years ago

sagnikbanerjee15 commented 4 years ago

Hello,

I foresee a time in the near future when I will be working with a very large number of samples (~2K) from various different sources of the same organism. Will PsiCLASS be able to handle such a large number of samples assuming there is sufficient memory and hard disk space?

Thank you.

mourisl commented 4 years ago

The largest one I tried have 667 samples. 2K samples should be fine, but may take 50G memory.

sagnikbanerjee15 commented 4 years ago

Awesome! Thanks.