Add allele information to postprocessing?

spond / IgSCUEAL

B-cell 454 processing

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Add allele information to postprocessing? #12

Open sdwfrost opened 9 years ago

sdwfrost commented 9 years ago

The reference alignments only contain the *01 alleles for the V genes. Should there be an additional postprocessing step to compare the query sequence to the different allelic forms, if the family and gene is identified?

spond commented 9 years ago

Yes, that would be desirable, but probably in the want (vs need) category for rearrangement mapping for a single host, since, presumably, only a single allelic form will be present.