sqjin / CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
GNU General Public License v3.0
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The missing tutorial data of spatial-informed cell-cell communication #546

Open QianhuiXu opened 1 year ago

QianhuiXu commented 1 year ago

Hello,

cellchat is a wonderful tool! I ran into an issue with running cellchat of spatial-informed cell-cell communication.

I cannot find the example data: visium_mouse_cortex_annotated.RData.

I'm really at a loss as to how to proceed, and any guidance would be much appreciated! Thank you for your kind help!

Feng-xixuan commented 1 year ago

Hello Have you solved it? I have the same problem I'd appreciate it.

sqjin commented 1 year ago

@Feng-xixuan You can now find the example data via https://figshare.com/articles/dataset/10X_visium_data_for_spatial-informed_cell-cell_communication/23621151