How to extract differential interaction & pathway information

sqjin / CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data

GNU General Public License v3.0

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How to extract differential interaction & pathway information #690

Open abulislam opened 1 year ago

abulislam commented 1 year ago

We have two dataset to compare TEST and WT. We have various cell types including A, B and C. I was wondering whether it would be possible to have tables for A, B and C showing which pathways are different when TEST is compared to WT.

sqjin commented 1 year ago

@abulislam Please check ## Identify dysfunctional signaling by using differential expression analysis in the comparison tutorial.