Insert own DEG list in cellchat object for comparison analysis

sqjin / CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data

GNU General Public License v3.0

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Insert own DEG list in cellchat object for comparison analysis #702

Open zeniazen5 opened 11 months ago

zeniazen5 commented 11 months ago

Hey there, I want to add my DEG list to the cellchat merged object. I am comparing the cell-cell communication between two different conditions. Through the DEGs, i want to find the disrupted pathways in my experiment's mutant condition. Have you implemented a way to insert your own DEG list and then use the netmappingDEG function? Thank you in advance ! Best Zenia

kabagenyi commented 11 months ago

Same question as well.