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sr320 / ceabigr

Workshop on genomic data integration with a emphasis on epigenetic data (FHL 2022)
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install nextflow on Raven #47

Closed shellywanamaker closed 2 years ago

shellywanamaker commented 2 years ago

here's a log with how I installed nextflow on mox and on roadrunner. @ksil91 you can reference the part of the roadrunner part of the log:

https://github.com/shellytrigg/Salmon_sealice/blob/master/analyses/20201027/install_nf-core_Nextflow.log

ksil91 commented 2 years ago

Instructions for nextflow: https://www.nextflow.io/

instructions for epidiverse https://github.com/EpiDiverse/snp

ksil91 commented 2 years ago

https://docs.docker.com/engine/install/

sudo apt-get remove docker docker-engine docker.io containerd runc sudo apt-get update

sudo apt-get install \
    ca-certificates \
    curl \
    gnupg \
    lsb-release

curl -fsSL https://download.docker.com/linux/debian/gpg | sudo gpg --dearmor -o /usr/share/keyrings/docker-archive-keyring.gpg

sr320 commented 2 years ago

should be installed