sr320
commented
7 years ago Great item to tackle tomorrow in class! On Wed, Dec 7, 2016 at 4:06 PM Yaamini Venkataraman < notifications@github.com> wrote:
I watched the video about DAVID https://www.youtube.com/watch?v=D2XjF2xqbF4&feature=youtu.be and ran my analyses (notebook here https://github.com/yaaminiv/yaaminiv-fish546-2016/blob/master/notebooks/2016-11-30-oly-gonad-OA-part6-enrichment-analysis.ipynb ).
I downloaded a whole slew of files:
- GO charts on biological processes https://github.com/yaaminiv/yaaminiv-fish546-2016/blob/master/analyses/oly_oa_gonad_GO_enrichment/GO_BP_DIRECT.txt, cellular component https://github.com/yaaminiv/yaaminiv-fish546-2016/blob/master/analyses/oly_oa_gonad_GO_enrichment/GO_CC_DIRECT.txt and molecular function https://github.com/yaaminiv/yaaminiv-fish546-2016/blob/master/analyses/oly_oa_gonad_GO_enrichment/GO_MF_DIRECT.txt
- cluster analysis https://github.com/yaaminiv/yaaminiv-fish546-2016/blob/master/analyses/oly_oa_gonad_GO_enrichment/GO_DAVID_clustering.txt -annotation table https://github.com/yaaminiv/yaaminiv-fish546-2016/blob/master/analyses/oly_oa_gonad_GO_enrichment/GO_DAVID_annotation_table.txt -interpro table https://github.com/yaaminiv/yaaminiv-fish546-2016/blob/master/analyses/oly_oa_gonad_GO_enrichment/GO_DAVID_INTERPRO.txt
I have all of this information but no idea how to understand it. I also don't know if there's something else I should look at that I don't have here. Any ideas?
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I watched the video about DAVID and ran my analyses (notebook here).
I downloaded a whole slew of files:
I have all of this information but no idea how to understand it. I also don't know if there's something else I should look at that I don't have here. Any ideas?