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sr320 / course-fish546-2018

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Oyster genes for bedtools intersect #69

Closed hgloiselle closed 5 years ago

hgloiselle commented 5 years ago

I'm hoping to use bedtools intersect in order to see if the SNPs I identified are located in gene regions. I was wondering what to use as a reference for the location of the genes

sr320 commented 5 years ago

Here is track to compare with you SNPs using bedtools intersect http://owl.fish.washington.edu/halfshell/genomic-databank/Olurida_v081.all.sorted.gff

(Details on how it was made: http://onsnetwork.org/kubu4/2018/08/08/genome-annoation-olympia-oyster-genome-annotation-results-02/)