Navigating the commandline

[sr320]

This week you will be completing the following tutorial. https://github.com/sr320/course-fish546-2021/blob/master/01-Notes/Tutorials/Navigating-commandline.md

Try to complete prior to class on Thursday. And feel free to post an issue if you have any questions.

Please paste in your commands (what you did in bash to complete the exercise)

[aspencoyle]

whoami
cd /mnt/c/Users/acoyl/Documents/GradSchool/Classwork/Winter_2021/Bioinformatics_FISH546/Week_1/data
ls
cd users/nelle
ls
ls -F
ls -F data
ls -F /data
pwd
ls
cd data
pwd
ls -F
cd ..
pwd
ls -F -a
ls north-pacific-gyre/2012-07-03/
ls -F
mkdir thesis
ls -F
ls -F thesis
cd thesis
nano draft.txt
ls
rm draft.txt
ls
cd ..
ls molecules
cd molecules
wc *.pdb
wc -l *.pdb
wc -l *.pdb > lengths
ls lengths
cat lengths
sort -n lengths
sort -n lengths > sorted-lengths
head -1 sorted-lengths
sort -n lengths | head -1
wc -l *.pdb | sort -n | head -1
cd ..
cd north-pacific-gyre/2012-07/03
wc -l *.txt
wc -l *.txt | sort -n | head -5
wc -l *.txt | sort -n | tail -5
ls *Z.txt

[skreling]

whoami cd Users/tracykreling/shell-novice/data ls cd users/nelle ls ls -F ls -F data ls -F /data pwd ls cd data pwd ls -F cd .. pwd ls -F -a ls north-pacific-gyre/2012-07-03/ ls -F mkdir thesis ls -F ls -F thesis cd thesis nano draft.txt ls rm draft.txt ls cd .. ls molecules cd molecules wc .pdb wc -l .pdb wc -l .pdb > lengths ls lengths cat lengths sort -n lengths sort -n lengths > sorted-lengths head -1 sorted-lengths sort -n lengths | head -1 wc -l .pdb | sort -n | head -1 cd .. cd north-pacific-gyre/2012-07/03 wc -l .txt wc -l .txt | sort -n | head -5 wc -l .txt | sort -n | tail -5 ls Z.txt

[jdduprey]

pwd whoami cd /Users/dishajpatel/Desktop/shell-novice/data/users/nelle ls ls -F ls -F data ls -F /data pwd ls cd data pwd ls -F cd .. pwd ls -F -a ls north-pacific-gyre/2012-07-03/ pwd ls -F mkdir thesis ls -F ls -F thesis cd thesis nano draft.txt ls rm draft.txt ls cd .. ls molecules cd molecules wc .pdb wc -l .pdb wc -l .pdb > lengths ls lengths cat lengths sort -n lengths sort -n lengths > sorted-lengths head -1 sorted-lengths sort -n lengths | head -1 wc -l .pdb | sort -n | head -1 cd.. cd north-pacific-gyre/2012-07-03 wc -l .txt wc -l .txt | sort -n | head -5 wc -l .txt | sort -n | tail -5 ls Z.txt

[laurel-nave-powers]

whoami pwd cd Desktop/shell-novice/data/users/nelle ls ls -F ls -F data ls -F /data pwd ls cd data pwd ls -F pwd cd .. pwd ls -F -a ls north-pacific-gyre/2012-07-03/ ls -F mkdir thesis ls -F ls -F thesis cd thesis nano draft.txt ls rm draft.txt ls ls molecules cd .. ls molecules cd molecules wc .pdb wc -1 .pdb wc -1 .pdb > lengths ls lengths cat lengths sort -n lengths sort -n lengths > sorted-lengths head -1 sorted-lengths sort -n lengths | head -1 cd .. cd north-pacific-gyre/2012-07-03 wc -1 .txt wc -1 .txt | sort -n | head -5 wc -1 .txt | sort -n | tail -5 ls *Z.txt

[meganewing]

whoami pwd cd Desktop/shell-novice/data/users/nelle ls ls -F ls -F data ls -F /data pwd ls cd data pwd ls -F cd /users/nelle cd .. pwd ls -F -a ls north-pacific-gyre/2012-07-03/ pwd ls -F mkdir thesis ls -F ls -F thesis cd thesis nano draft.txt ls rm draft.txt ls ls molecules cd .. ls molecules cd molecules wc .pdb wc -l .pdb wc -l .pdb > lengths ls lengths cat lengths sort -n lengths sort -n lengths > sorted-lengths head -1 sorted-lengths sort -n lengths | head -1 wc -l .pdb | sort -n | head -1 cd .. cd north-pacific-gyre/2012-07-03/ wc -l .txt wc -l .txt | sort -n | head -5 wc -l .txt | sort -n | tail -5 ls Z.txt

[dippelmax]

whoami pwd cd Desktop/Fish546/data/users/nelle ls ls -F ls -F data ls –F /data pwd ls cd data pwd ls -F pwd cd .. pwd ls -F -a ls north-pacific-gyre/2012-07-03/ pwd ls -F ls -F thesis cd thesis nano draft.txt It's not "publish or perish" anymore,
it's “share and thrive”. Control O Control X ls rm draft.txt ls pwd cd.. ls ls molecules cd molecules wc .pdb wc -l .pdb wc -l .pdb > lengths cat lengths sort -n lengths sort -n lengths > sorted-lengths head -1 sorted-lengths sort -n lengths | head -1 wc -l .pdb | sort -n | head -1 cd .. cd north-pacific-gyre/2012-07-03/ wc -l .txt wc -l .txt | sort -n | head -5 wc -l .txt | sort -n | tail -5 ls Z.txt

[Brybrio]

whoami ls cd Desktop/shell-novice/data ls cd users/nelle ls ls -F ls -F data ls -F /data pwd ls cd data pwd ls -F cd .. pwd ls -F -a

ls north-pacific-gyre/2012-07-03/ ls north-pacific-gyre/2012-07-03/

pwd ls -F mkdir thesis ls -F ls -F thesis cd thesis nano draft.txt Ctrl+O Ctrl+A ls rm draft.txt ls cd ..

ls molecules cd molecules wc .pdb wc -l .pdb wc -l .pdb > lengths ls lengths cat lengths sort -n lengths sort -n lengths > sorted-lengths head -1 sorted-lengths sort -n lengths | head -1 wc -l .pdb | sort -n | head -1 cd ..

cd north-pacific-gyre/2012-07/03 wc -l .txt wc -l .txt | sort -n | head -5 wc -l .txt | sort -n | tail -5 ls Z.txt