Closed colindean closed 3 years ago
Nice; does it use the official sridca/neuron image? If not, how is the image built?
It does! The neuron
whalebrew container adds only port mappings, volume mapping, and a working directory.
There are some caveats to some neuron
commands: https://github.com/whalebrew/whalebrew-packages/blob/master/neuron/README.md
@colindean Nice. When does the whalebrew image get rebuilt? Does it rebuild on every update to the sridca/neuron
upstream image?
I'm not sure of the frequency of rebuild. I'll try to find out.
I just installed neuron through whalebrew
but was unable to reach the webserver from http://127.0.0.1:8080
neuron gen -wS
? Serving /Users/john/.neuron/output at http://127.0.0.1:8080
59931b3b7307 whalebrew/neuron "neuron gen -wS" 4 minutes ago Up 4 minutes 0.0.0.0:1440->1440/tcp, 0.0.0.0:8080->8080/tcp hardcore_rosalind
curl: (52) Empty reply from server
Try this suggestion from the neuron whalebrew README:
Use -s 0.0.0.0:8080 or :1440 when invoking neuron rib when you want to use Rib's built-in server from within the container.
Neuron has been added to Whalebrew's core packages. It may take a couple of minutes/hours to build and push to Docker Hub.
I'll probably add this to the guide myself in a PR next week if someone else doesn't get to it before me.