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srikanthguduru / imrmc

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No error reported when iMRMC fails to import an input file #1

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago 
What steps will reproduce the problem?
1. Select input method -> Input raw data
2. Browse to the attached data file
3.

---
What is the expected output?
An error should be produced because the file is missing the definition of a 
truth state.

---
What do you see instead?
Nothing

Please use labels and text to provide additional information.

Original issue reported on code.google.com by Brandon.Gallas on 31 Jan 2014 at 9:40

Attachments:

GoogleCodeExporter commented 9 years ago 
Typical errors in formatting are as follows:

The truth state of every case must be defined once and only once.
        ERROR: Truth states not defined for all the cases.
        ERROR: Truth states multiply defined. 
The row containing "BEGIN DATA:" must be typed exactly as given.
        ERROR: "BEGIN DATA:" not all upper-case.
        ERROR: "BEGIN DATA:" not terminated with a colon. 
Commas with no spaces must be used to separate the four fields of data 
describing each ROC rating.
        ERROR: Spaces, tabs, or semicolons separate the data in the list of ROC ratings. Only commas should be used.

Original comment by Brandon.Gallas on 31 Jan 2014 at 9:42

GoogleCodeExporter commented 9 years ago

Original comment by Brandon.Gallas on 31 Jan 2014 at 10:08

GoogleCodeExporter commented 9 years ago

Original comment by Brandon.Gallas on 1 Feb 2014 at 1:26

GoogleCodeExporter commented 9 years ago 
[deleted comment]
GoogleCodeExporter commented 9 years ago

Original comment by mike.mik...@gmail.com on 6 Feb 2014 at 3:22

GoogleCodeExporter commented 9 years ago

Original comment by Brandon.Gallas on 10 Feb 2014 at 3:15

GoogleCodeExporter commented 9 years ago 
I have come across a new error. When reading the header information, there are 
four important rows that might be encountered that may or may not be present. 
They are identified as
N0:
N1:
NR:
NM:

If something is wrong with the formatting of these rows, there is no error. The 
file input just fails silently.

Original comment by Brandon.Gallas on 2 Mar 2014 at 9:17

GoogleCodeExporter commented 9 years ago 
Made a lot of progress by adding data checks with pop-up button windows for 
error reporting. You can realize many errors by using "Input Raw Data" method 
and browsing to the files in "imrmc/000related/FilesTest". The error reporting 
is crude and should be improved. For one thing, it should stop the current 
processes and reset iMRMC (the equivalent of hitting the reset button in 
GUIInterface).
The data checks and error reporting that I wrote can be found in
mrmc.InputFile.verifySizesAndGetIDs
mrmc.InputFile.processScoresAndTruth

Original comment by Brandon.Gallas on 3 Mar 2014 at 8:19

GoogleCodeExporter commented 9 years ago 
Issue 8 has been merged into this issue.

Original comment by Brandon.Gallas on 3 Mar 2014 at 8:20

GoogleCodeExporter commented 9 years ago 
I believe that this issue is fixed.

Original comment by Brandon.Gallas on 5 Mar 2014 at 9:40