sriram-lab / egem

epigenome scale metabolic modeling for cancer metabolism
MIT License
4 stars 2 forks source link

Add correlation map to EDA #60

Closed ScottCampit closed 4 years ago

ScottCampit commented 4 years ago

Hi Rachael, overall you have really effective code that correctly computes the Pearson Correlation coefficient directly! As we discussed last Friday, it also needs to be edited so that the p-value is computed as well. Here are some notes for improving the code.

I have included an example of how your code can be written up (as MET2GCP_CORR.upynb, and you can use that as a reference for your future notebooks.

Feel free to check that file out. When you're done adding the code that computes the p-value, you can merge your code with the master branch by pressing the green button!