[interhelp #24581] temporary directory location not passed to distributed workers

[GoogleCodeExporter]

What steps will reproduce the problem?
1. set temporary.file.directory in interproscan.properties to something other 
than temp/...
2. run in cluster mode and do not specify -T option. Use the default value
3.

What is the expected output? What do you see instead?

Expect that the distributed workers use temp directory in 
temporary.file.directory. Instead it uses temp/

What version of the product are you using? On what operating system?
interproscan-5.4-47.0 on debian 6.0.6 with SGE

Please provide any additional information below.

Original issue reported on code.google.com by jwcarl...@lbl.gov on 1 Aug 2014 at 6:35

[GoogleCodeExporter]

Original comment by Maxim.Sc...@gmail.com on 4 Aug 2014 at 8:26

• Changed title: [interhelp #24581] temporary directory location not passed to distributed workers

[GoogleCodeExporter]

Hello,
I have the same problem. Is there some workaround for this issue? I've tried to 
play with the options with no success

Original comment by anthony....@gmail.com on 14 Aug 2014 at 10:12

[GoogleCodeExporter]

Hi,

We managed to reproduce the problem here - it's true, the distributed workers 
do seem to ignore the temp directory supplied in the interproscan.properties 
file.

Apologies for the inconvenience, we'll need to look at fixing that in a future 
release. 

For now, if you always supply the -T command line option then that appears to 
give a possible workaround https://code.google.com/p/interproscan/wiki/HowToRun

Regards,

Matthew

Original comment by Mr.Matth...@gmail.com on 18 Aug 2014 at 12:41

[GoogleCodeExporter]

Fixed and committed now. Will be part of release 5.8-49.0.
https://code.google.com/p/interproscan/source/detail?r=4842

Original comment by Maxim.Sc...@gmail.com on 11 Nov 2014 at 4:26

• Changed state: Fixed