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ssadedin / bazam

A read extraction and realignment tool for next generation sequencing data
GNU Lesser General Public License v2.1
99 stars 16 forks source link

Realignment to new ref needs recalibration? #29

Open TnakaNY opened 3 years ago

TnakaNY commented 3 years ago

My bam is realigned and recalibrated after 1st mapping to old ref.

If I realign my bam to new reference, should I do realign and recalibration again?