results upload

[lkeegan]

results from runner analysis script will be:

• csv file
• breakpoint between reactive/non-reactive rows in csv file
• visualisation of results
  • todo: this could either be
  • generated as png/svg by the script (easier to modify in the future)
  • or the website could generate the visualization from the results directly

[EdGreen21]

this is an interesting one... we could actually use the results to connect to other tools we have developed to clone TCRs... i.e. go from sequence on the screen to DNA in a tube. These are also implemented in R, though a key part might run better in python... I'll think about this

[EdGreen21]

if we get the TCR manufacturing paper out, then we could use this to drive academic interest towards our solution

[lkeegan]

Following today's discussion on uploading the results:

• the script

  • takes a full_results argument that specifies if the user should get partial or full results
  • puts generated result files into two folders:
  • user_results/
    • these files will be provided to the user from the website as a zipfile to download
  • admin_results/
    • these files will only be accessible by admins (also as a zip file)
    • should also contain logs for debugging failed runs

• the runner

  • passes the full_results argument to the script
  • zips & uploads the contents of the user_results folder for web access by the user
  • zips & uploads the contents of the admin_results folder for web access by admins