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ssciwr
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predicTCR
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https://predictcr.lkeegan.dev
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Add CSV file upload
#9
Closed
lkeegan
closed
1 month ago
lkeegan
commented
1 month ago
replace single zip file upload with two file uploads: one h5 file, one csv file
replace
/input_file
endpoint with
/input_h5_file
and
/input_csv_file
update model, endpoints and runner accordingly
validate csv file on frontend
parse first line and extract column names
require that "barcode", "cdr3", "chain" are present
resolves #3
validate file sizes
h5 must be less than 50MB
csv must be less than 10MB
resolves #2
increase nginx/flask body limit to 100MB
/input_file
endpoint with/input_h5_file
and/input_csv_file