Create a BGZIP index (BGZF) on the fly

sstadick / crabz

Like pigz, but rust

The Unlicense

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Create a BGZIP index (BGZF) on the fly #17

Open nh13 opened 2 years ago

nh13 commented 2 years ago

See: http://www.htslib.org/doc/bgzip.html. This should not be too hard if you keep the uncompressed and compressed byte offset of each block you are processing. Right now, I have to use bgzip to create the index.

sstadick commented 2 years ago

I do really want this and just haven't gotten around to it / needed it myself yet.

nh13 commented 2 years ago

Maybe I’ll make a PR